Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902033.1_cds_XP_016452042.1_46324
CDS Infomation

[gene=LOC107776644] [db_xref=GeneID:107776644] [protein=histone deacetylase HDT1-like] [protein_id=XP_016452042.1] [location=complement(join(36150..36213,36292..36418,37954..38041,38135..38197,38692..38867,38969..39036,39147..39361,39446..39516,40623..40635))] [gbkey=CDS]
Sequence

ATGGAGTTTTGGGGTGCTGAAGTGAAAAGTGGAGAGCCTTTAACTGTACAGCCTGGAGAT
GGGATGGTTTTGCATCTTTCACAGGCATCTCTTGGTGAGTTGAAGAAGGATAAAGTACAA
AGTGTCTGCTTGTCTGTGAACATTGATGGCAAGAAACTTGTCCTTGGGACACTCAACTCA
GATAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAGAGACTTTGAGTTATCACAC
AACTGGAAAAATGGCAGCGTCTACTTTTTTGGATACAAGGCCACTAATCCGTTTGAGGAG
GAAGAGGATGATGAAGACGATGAAGAAGAGTCTGATGAGGACATCCCTCTTACTATTGCA
AACAATGGGAAACCTGAGGCTAAGGTTAAGGAGGCAGAGAAGTCTAATGCTGCAAAGGAT
TCTGCTTCAGGTAAGCAGAAGGTTAAGATTGTGGAACCTAGTAAAGATGCCAAGGCAGAT
GATGAAGATGAGAGCACTGATGAAGATGAAATGTCTGAGGATGAAGATTCAGACGTGGGA
GAGGGCGAAGATGAGAGCGACGAGGATGATGAGTCTGATGAGAGTGAGGAGGAGACACCA
AAGAAGGCTGAACCTGGCAAAAAGAGGAAGGCAGATTCGGCTACAAAAACACCCGCGGAT
AAGAAGGCAAAATTTGTAACTCCTCAAAAAACTGATGGCAAAAAAGGTAGCGGCCATGTA
GCGACCCCTCATCCCTCAAAACAGGCTGGCAAGTCTCCTGCAAACAAGAACCAGCAGACT
CCAAAATCAGGCGGCGCTCATCTCTGCAAGACATGCAACAGGGGTTTTGGTTCTGAAAAT
GCTCTTGAATCTCACTCCAAAGCTAAGCACAGTGCTGCAAAGTAA

Peptide Sequence

PEP ID

XP_016452042.1
PEP Infomation

PREDICTED: histone deacetylase HDT1-like [Nicotiana tabacum]
Sequence

MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS
DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTIA
NNGKPEAKVKEAEKSNAAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDVG
EGEDESDEDDESDESEEETPKKAEPGKKRKADSATKTPADKKAKFVTPQKTDGKKGSGHV
ATPHPSKQAGKSPANKNQQTPKSGGAHLCKTCNRGFGSENALESHSKAKHSAAK

Transcript Sequence

Gene sequence data has not been registered.